MmuEX6101804 @ mm9

Exon Skipping

Gene

ENSMUSG00000027022 | Xirp2

Description

xin actin-binding repeat containing 2 [Source:MGI Symbol;Acc:MGI:2685198]

Coordinates

chr2:67343560-67355230:+

Coord C1 exon

chr2:67343560-67343632

Coord A exon

chr2:67345104-67345237

Coord C2 exon

chr2:67345966-67355230

Length

134 bp

Sequences

Splice sites

3' ss Seq

TTATCTACTTCTCTTTGTAGTCA

3' ss Score

7.99

5' ss Seq

AAGGTAAGG

5' ss Score

10.51

Exon sequences

Seq C1 exon

ATGTCACATCTTGAAAAGCACACTGAGGAAACAAAGCAAGCTTCACAGTTTCATCAATATGTTCAAGAAACAG

Seq A exon

TCATTGATTCGCCAGAAGAAGAAGAGCTTCCTAAGGTTTCCACTAAGATTTTAAAAGAGCAATTTGAAAAGTCTGCCCAGGAAAACTTCCTCCGCTCTGATAAAGAAACATCACCCCCAGCCAAGTGTATGAAG

Seq C2 exon

ATTGAAAATGACATTGAAGAAACCTTAAAGCCATCATCGGCTGTGGGTACCTCTTCTTCTTATACTTCAACCAGGCAGAGGAAGGAAACTTCAACCTCAAGTTATAGTAATCACAGTCTGACTTCAACAACTCTGGCACAAGATAATGGCACTCCTTCAGGGAAGATGGAAGAGTTTCCTCCTCCCCCACCTGATGTTTGTCAGACACCAATGGATGTGACAGCATTTTCCCAGTCCCCTGAATTCCCCAGCCCTCCTAGAAGACTGCCAATGCCCAAAGATTTATACTCCAAGCAAAGAAATTTATATGAATTAAACCGTTTATATAGGCATATCCATCCAGAGTTAAGAAAAAACTTAGAAAAAGATTACATCAGTGAGGTTTCTGAAATTGTTTCTAGCCAGATAAACTCAGGGAACGCGTTATCAGCAGATGTACAAAAAGCTCGGTATGTTTTCGAAAATACAAATGACAGTTCTCAGAAAGATTTGAACTCAGA

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000027022-'6-9,'6-8,7-9=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.893 A=0.741 C2=0.511

Domain overlap (PFAM):

C1:

NO

A:

NO

C2:

PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5),PF080437=Xin=WD(100=0.5)

Main Inclusion Isoform:

ENSMUSP00000028410