MmuINT0028753 @ mm10
Intron Retention
Gene
ENSMUSG00000079110 | Capn3
Description
calpain 3 [Source:MGI Symbol;Acc:MGI:107437]
Coordinates
chr2:120463579-120480752:+
Coord C1 exon
chr2:120463579-120464181
Coord A exon
chr2:120464182-120480682
Coord C2 exon
chr2:120480683-120480752
Length
16501 bp
Sequences
Splice sites
5' ss Seq
CCGGTGAGT
5' ss Score
10.9
3' ss Seq
TTTCTGTTTTGATTTCACAGGAA
3' ss Score
10.69
Exon sequences
Seq C1 exon
TCTTCTTCTCCCTCTGGCAAGTGCGCTGCTGAAGGCCACTAGGTAGAAACTGCGTCTAAATCCTTTATTGACTCTTCCTCAGGAAAACCTATCGCTCTAGGGTCATAGTTCACTATTTGAGCTGGTCAGAAGCCAGTCAGTTTTCTGATAGGATTTAAACTTTGAAGAGACTGTGGCCATTTTTTTCCTCAGATGACAGAATCACTTCAACTTCAGCTTTGTAATCACTTCCTTTCCTTGAAGGTAGCTGAATCTCATTTTCTTTAAAAAGTCTTCCTTCCAAAGTTGCCTGCCATGCCAACTGTTATTAGTCCAACTGTGGCCCCAAGGACGGGGGCTGAGCCCAGGTCCCCAGGGCCAGTTCCTCACCCAGCTCAAGGCAAGACCACCGAGGCTGGAGGTGGACACCCAAGTGGCATCTATTCGGCCATCATTAGCCGCAATTTTCCGATCATCGGTGTGAAAGAGAAGACATTTGAGCAGCTCCGCAGGAAGTGCCTAGAGAAGAAAGTTCTTTATCTAGACCCCGAGTTCCCACCGGATGAGACCTCTCTCTTTTACAGTCAGAAGTTCCCCATCCAGTTCGTCTGGAAGAGACCTCCG
Seq A exon
GTGAGTAGCTTACTGGTTTTGTAGCTGGCTGGAGTTTGCTTCAGAGACGTCCTCCCACTCAGCACCTCCCCAAGCACAGCTGGGCACATGGACACGGGGAAGGATCCTGGCAGGGGCCAGGGCTCTGGCTGCAAGTGCAAAAAGGAGAGGACAGGGTCAAGTCTAAGAAAGTCTAAGAGGACAGGGTCAGGGCTGCTTCTCTCACACTTTCTCGCTTTCTGCTGTTCATGAAAGTAATTAGATCCTAAATTTATCTTTAAAATGGCCATCCTTTCCCCAGAATCAGTGCCACGGTGGCCAGAGCTATACTCTCTGCCTCACTATATTGAGACGTCTTCCATTTCTCAGGCTAAAATCATGAGATGCTGTTCTTTTTGTTTTGGACATTTGCCAGGGACCGTGGATTTCTGAAACACAGAAGCCAGGGAAAGAGGAGAGAGGCAAAGACTACTTTTTATAACATAACATTGAGACTAGAAGAATTTTTGCCTTTATACCTCACTGCATAAATTAGGATGCCAAAACCCAGCAATAGACTGAGCATATGACAGAACCTGAATGAAACCCTGCTTGCTAGGGACCCACCAGAAGGGAAATTATGTTTCCCTGGCTCCCTTCTCTCATAGTGCCTCCAATGTGACTCTTGTTTTTGAAACAAGAAACATTTTAGTCACAAAACAATCTGGGGCTAGGAGTAACACTTAGTGGTAGAGTTCTACTTAGCATGTCAGAGGCCGCTTGTGCAATCTCTGGCACTGCTAACCAGTCAGTAAATAAACATAAAAAGGGGAAGAGAGAAAAAATAATCACAGAAAAGAGGGAGAAATAGATGTTGCAGGTCCACTAGCTTCACATACTGGGCAAGTTACTAGGAGGAGTGTTGTGAACAAGAGACCACAACTTACACTGTTGCGAAGACTAGAGTCTTGAGGAGAATGTGGACATTTAGGTCCAGTGGTCACCAGGACTCTGTCATCACAGAGTGGATGGGATCAAAGAGAGCAGGCCAGGTCAGGGGTGAGAAACCTTTCACAAAGAAGTGATGCTGGGCTCTTCACAGGATTCATTGGCCATGTTTTTCTCTATTTACTAACTAGAGCTGTCTCCTGTCCCCTTCTGCTGTCCTTTGGTAAGTCCCATCCATGGCTGTCATGAATGTCCTCAGCTTAGAAGAGCAGGCTGCAGTAGGCTGGGTGTAGCTCAGCACACACCTAACATGTGTGAGGTCCCAAGCCAAGGTGGACAACCCAAGCAATGCGCTTAGACACACTGTGCCCCCCCACCCCGCTCAGCCCCCACTACCTGCAGCATAAGTTCAAACTGCCTCACTGAGCACAGCCCTTCTCAAGCAGACCCGTGCCTGACCTCTCACCTTCACTCTCTTCTCTAAATGCTGTAGCGGAACATCTGGCTGCAGTGGAACATCTGGCTGCAGTGCCCTACTAGGGTTTGGTTGATTGGCTCTGCCTTGCATTCTCTACTTCAATGTCACTTCCCTCAACTTCTCTCACCTCTCCTGGTGCTGAGAGCAGGGTCTGTTTGTGGTCATTCGTAGACCCTGTACATATTCTGAACATAATAAGATACAGATGCTGGTAGCAAATGAATACCCACATCTAAGGGTCTACCCAGGACAGCCCTGCCTTCCAAAGTAGGGAACCCCTAGAAGCTTTGTCTAATTGTACTCAAGGGGCAAAGGGACCAAAACCTACAAACACTGTTTTTACTAAAATCACTGGTGGCTTTGAACCTAAAAGCTAGATTTGCAAATCTGCAATGTTCTGTGGCAGTGACTGGTCTATGAGCTCATATGGACCAGTATGCTCCAAGAGACCTGGCTGTTTGATATTCTTCCCCTCTCACCACCACCAACAACAAAGATCCTGAATTTTCAAACCATCTTGGTTAAAATGCCATTTGTCCCTCCATGGTTAAGATCAGTGGGTTGGAGAGATGACTCAGTGATTAAGAGCACTTCCTGCTCTTGAAGAGAACGTGTGTTTGGTTCCCAGCACCTACATGTGGTGGCTCACAGCTGTGAGACTCCAATTCCCAGGGATCCAGTGCCTCTTGTGATCTCTGCAGGCACCAGCACACATTCATGCACTCAGGCACACATACATATGTACATATAAAATTAAAGGTCAGGACATACTTGTATTAACATTCTAAAATGGGTTTAGAGGTGGGCAGAGTTGGAACGGGTCAGGGAAGTGTTATCCAAACCCTTCGCTTTACATGATTATGACCCAGAAAGTGCAAAGAACTTATGTATATTGAAATGGCTCCAGAACTTTCTAAAATATAACCCTTCTTGGAAACATTTGTTCTCCCAAACATTTCCTTGGATATAGTAACCTCTGTCAGGCCTTAGAGTATGAAGAAGCATGTCCTATGAGGAAAAGGAGGAGATGAGGGCTTCGTTTCGCTGGCATATCTACTCCCTGCTGCCTGCTGTTAGTGTTTTAAGCCCACATCCAGCTAAATTTGCTCTGCCCAACTGTCTAACCTTCACTCCTTCACCTCGCTAGTTCCCTAGCTGCTGACACCTGTGCCTGAAGGAAGCCTCCAGTCAGACAGAAGCCCCTCAGTCCTCCATTCAGGAGACCTACTGCTTATTACCATAACTGGACATTTCTTGAATTAGGCTCCAAAGGTGACGTTTAAATGAGTTTCCTAAGCTGCCACTAATCAACAACCATGTGTTACCGAGTTGAGGTGTTCAGCCTAGCATTGCTTGATCTCCAAGTCCATAGCGGGTAATGGCCATCCCCTCACCCCACCAAGCACTTTGGAAGGAAGCCTGGTGGTGTAAGATCAACTGTGGCTTCAGCACTGTGGAGGGAAATATGAGGGAAGTACTGCAGTGGGTGGGAAAAGAGACTCATGAGACTCTTGCCCACCAGCATGAATTCAGCCACCTTGGCTAGATTCTGCTGCTCTCTGTGTGACCTGCAGGCTTCCTGCCATCCTTATGCCCCTTCCAGGATCTTCACTATCTGGGCTGAAGTAACTCATCCCCAGCCCCAAGGCAGTTATTACAGGAATGCAAACAACAGCTAAATACACTCTGGGCATCAGGAGTCTTGTTCCTGAGAGAATTTGTCTGATTGTTTGCATGTCTTTAGCAGATGTACTTCCTCTCTGAATCCTTACCATAGCAGAAATGTTCTGTCAAGAGGAAACACAAATGGGAGAATGAGAGAGAGGGAGAAAGAGAGAGGGAGAGAGAGGGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTGTGTAATCCCATAACTATAGGTTCATGCAGAGTCCAGAAGAAGGCAGCTGAAGATGGACTCACTGGCTGTTGCTGTTGTAAGCTGCCTGATAACTGAACACACATCCTTTGCAAAAGTAGTATGTGCTCTTTAACCTATGAGCCATCTCTCCAGCCTGCATTATAATTACATAAAGAGTACTTGAGCCAGGCTCGTGGGTACCTGCCTACTACTACCGAGGGGGCTTCCTAGCTACTGAGGAAGCTGAGGCAGGAGGGCTGCTGACACTCTCAAGTTTGAGGCCAACCTGGGCAATATGAGGATCTTGTCACTTAAATACAAACAAAAACAAGTTAACAACAACAAAATACAGGGTGCTTTTTTTTTTTTTTTTTTTGGTTTTTGGTTTTTGGTTTTTTGAGACAAGGTTTCTCTGTGTAGTCCTGGCAGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATCAAAGGTGTGCGCCACCACTGCCCAGCCTGAGTGCTTTTCTTAAAGGAGGCAAACATGATTGTTTTCTAAAGGGAAAAAGGAAAGAAAAGGATCAGCTGGTTGATATATAACAAGAGTGAAAGGTAGACTGCACTGGAATTGGACTAGGGAAAGCCTGAGGTGCATGCACACACACACACACACACACACACACACACACTGCTCCTGCCATTCTCTATGGCCTAACAGCCACTGAAGCTGTGAAATACTTGAGACCAGTAACCTTTTGGGAAAGGGCAGACTTGCTCTGCATCCTGTCTTGAAGTGGCAGTGCTGAGCCAGCTTGCCAGTGTTAGAAAGCTCTGGAATGGAGAAAAACAAAGTGAGAGAAAATGCCCAGGCTTCACTGAGCTCTGGAGTGGGGGAGACAGAGGAGGAGACCCTGCCACTGAGAGGCTGTGGGTTGAAGACCTGTGTGAGTCTCCATGGATGCCCCAGGACCTCTCACACTTGGGAAGCATCCTGGCCACTCCACAGTGCCACTCAGTACAGCATGAAAACTGCTATTAAACACTCCATGTAAGTCCAGGAGCAAAATGTTGAAGAACAACTGTCAAAGGTCTGAGGTAGTTGGCTTTCCTCCTGACATGAAGAGTCAGAAGGGCAAAGGAGTTCTCCTTCCACACACACATGCTGTAATTTCCATATTGGAAAGCTTTTCATGTCTAGCGGGAAGTCATCTGGTTACAACCCAGACAACAGTAAAGGTATCCAGTGGTGTCCTCTGTTCCTCGGTTGTCACCCTATCTCTGGTTGCTTTATCAGATAGTCACAAAACGCTTGGGCAGGGGTTTATCCAGCTCAGGCCATTAGAGTCCTCAACTGCACAGCCAAGCCTCATTATCTAGATTCTATACTTGTTATTCTCCTACTTAAATTCATTGGTAACTTCCAAATCAATGCTGTGCTTCTGTGAATATTTGTGGACTTGCTCAGGACTCTGAAAACCTCAAGTCACCAGACATACTGGTTCCCAGCTGAGATCAAACAGTAGCCAACACATCTGCATCCTTAAGGAAGGGCTTTCTCCTGATTCCAGGAGGCCTCTGGGCTCTTCTGGGGCTCCACAGCCTCTAAAGTGAAGTCTATAATGGAGATGTCTTCCCAGCCTGGGGTCACTTAGTCAGTACTACTCAATTCTAAAATGAAGAAACACTAGGCTATATCAAAACAACAATTGTCCCCACATCATTGTGAGCAGATTTAGAGACAGCTGGACTCCAGGAGAACCTAGTCTACATAGAGGGACACCCAGCCCCAGACTACAAGCTTAACCACATAGCTTATTTCCCAGTGAAATTACCTTCCCAATGAAAGTGGGTTAGCAGGAGGTCTCTGCTTCCGATCTGTTATAGAATGTCTGCTGCCTTCTGTCAGACAGTTGAAAGGGAAGTTGGGTACCACACTAGCCACAAGAAGGAAGAACTAGGCCACAGTACACAGTAGTTTGAGACAGGATTTGAACAAGCAGACCTGGTGGGAAGCCTGGTCTGCTGCTAGCAGCAAGTCAGGAAAACGATCCAAGTTTCACTTTGCTTTTCCATAAAGGAGCTAAATGTACTCTCTGCTTAGCACGATACTGTGTGATGTCCCTAAAGTCCTAGCTCAGTGGTTCTCCACCTTCCTAATGCTTTGACCCAGTTCCTCATGTTGTGATGACCCCCAACCACACAATTATTCCCATTGCTACTCCATAACTGTAATTTTGCTACTGTTATGAATCATAATGATATCTGATATTTCCGATGGTTTAGGTGATCCCAAAGGGGTCTCACCCCACAAACTGAGAACCATTGTCTTAGATGCCTACAGTAAGGCAGTAATAGCCATTAACAAGAAAGCCCAGGACACAGGTTTTGAAACAAGGGGAACCAGAACTGTGCCCACCACTAAACCACGTGACTGACTACTCCTGGGTCTCAGCTTCCTCATCTGTAAAAAGCAAATGAAAACGCCAGCTTTCACTGAGTTCTGGAAGGATAAAACAGGATACTGCATCCAACATGTGCACACGTGCACACATGCACACACGCGCGCGCGCACACACACACACACACACACACACACACACACACGTAGCACAGTCAGTAAGTGGTGCTGGTGGTAACTGAAATGCTAATACTAACTTAGATGCTTGTTCTGGCTGCAGAGAATCACAGTAGCACCAAACCATCAACCCAGGACAGCAGAGGGTAGGGGAGGCTGCAACTGTTTTGGTGAAAGTGAAGGTTCTAGAAATAACAGTTAGGATTGCCTCAGCTCCTCCTGAGGGTCATGACAGGGACAGAGCTCCAGGGACCACAGTGAATACGTTGACATGACTTGGCAGGATAATGTAGAAAATGAGAAAGGCAGGGACAGAAATGACCAAGAAACCATGAAAAGATGCATTTGCCTTATAAAAAAGCCACAAATGCTTTCTGCACATTTGTATCGTTCTTTTTTAAATTACTATTTTATCCCTCCTCCTCTTCCTCTTCCTCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCTTCTCCTCCTTCTCCTCCTTCTCCCGACTTTGAGATAGGCTGGCCTGGAACACACAGGTTTGCCTGCTTCTGCTTTCTGAGTGCTGGGGTTAAAGGTGTGAGCTATCAAGTCTTTTTTATTTATTATTATTTAGTGTGCATCTGTACATGAATCACATGTGAGTTCCTCAATCCGTGTGTGTCAGAGGACAACTCTGTGGAGTTGGTTCTCTCCGTCCACGCCTACATGGGTCCCAGGGTTTGAACTCAGGTCAGGATATAGCAAATGCCTGTACCCACTGAGCTGTCTCACCGGCCCTACTCATGTCGTTCTAAACACTGCTAATCTCTTTTGCTCTTATAACATGTCTTACTTCTGATTTTTAAATTTATTTCTTGATTTATGTATTTACTTATTTAGTTATGTGTGGGTGTGCACATGCATGTGCCCTTGCAATGCATCCAGACATCAATGTCAGGACAACGACCAGGACTCAGTTCTCTTCCTCTACCACGTGGGTCCCAGGAACCAAACTCAGATCATCAGAATTGGCAGCAGGTGCCTCCCCCTGCTGAGCCATCTGTCTGGCCCATTTATTTTTCTCTTTTGTTTTCTTAAGTATGTTATTTTAGTTGGGGTTTCTACTGCTGTGAAGAGACACCACAACCACAACAACTCTTATAAAGGAAAACATTTCATTAGGGCTGGCTTACAGTTTTAGAGGCTTAGTCCATCGTTGTCGTGGTGGGAACATGGTGACATGGTGCTGGAGAAGTTGAGTCCTACATTTGGATCTTCGGGGAGCAGAAGGAGACTCTGCCTGGCCGACCAGACTTGAGCTTAAAGACCTCAGATCCTGCCTCCACAGCAATGCACTTCCTCGAGGCCACACCTCCTAACAGCGCCATTCCCTATGGGCCAGGCATTGAAACATGTATCGTGAGGGCCCTTCCTATTCAGCACCACAGATATCAATCAGCCTGCATTCATGCTCATTATGAGGCAAGCTTGTCATGTCCTTTCCTGATACACCAGCTTCACTAACTGGTTACGGGCCCTTCTTCCATTCTCTGAGATTGTATAAGATCAAAACTAATGCTCCTTAAATAGCTCCTGTTAGTGCTTTTTTCTAAAGGAAATATTTCATCTACAGATGTAACTGCTTTGATAATCATAGGATAGTATGACATTATTCTTTCTTTGTAAATCAGTGCTTATTGTTATTTTTCTAGGAATTTGTGGTAACTTCCTATGAAATTTTTGCTTTTGCTAAAAAGAAAAAATCTATCTTGTTAGATGTAGGTACGTAAACATTTTGCGTGTTTATATAAAATATACTTATTCTTTCACTTTTAACATTCCTGTGCTCTGATACCTTAAAATCATCTAAAACTCTAAAAAGTATTCAATCTTGGAGATGGAGAGATGATTTACCATCTGACCGCCCTAGCAGAGGACTGGCGTTCGATTCCCAGCACTGGTATGGGTGTGGTGGATCTCAACTGTCCGTAGCTCGAGTCCCGAGGGATCAGTGCCATCTTCCAGCCTCAGGCAGGCACATTAGTGAATACAGTGATACACTGCAGCCAGAACATCGAAACACATTAAAATAAATAGATTTTTTAAAATGTTAATTCAATCTCTAGCCAGCTTTGGCGAGTAAGAATCTTAAATCTTAGGACTCAGAGGAGGAGGGAGGCAGGGGAATCAGGAAGATCTGGAGGTCAAGCCTTGTCCACAAAGTGAGTTCAAGTCCAGCCTGCAGTATGAGAGCAGTTTCCCAAAAAGAAGAAAAATGCACTCCAATTTTTCTTTATTATTTACGTAATTTTAAACATTTATTTGTTTATTGTGTATACATGTGTGAGGGCAATAAGGGATGGACAGGGTAATATGCTTAACATACAATATATGCCAGTAAAAAATAATTGAGGACAATCTTCTTTTTATTATTGAGAATTTTATACATGTATATAATGGGGTTTTGTTTTGTTTTAAGATAGGGTCTCATTATGTAGCATTGACTGGATGGAACTCATTATATAGACCAGGATGACCTCAAAATCACAGAGATCTTCCTCTGCCTCACAAGTGCTGGGATCAAAGACATGTACCACCACCTCCAGCCATTAAGATGTTTTGATCAAATTCACACCCCAGCTGGGCGTGGTGGCGTATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGACTACACAGAGAAACCTTGTCTCCAAAAAAAAAAAAAAAAAAAAAATTCACACCTCGTCCCTGCTGCTACTTTCCCTTCCCCTCCCACGCCCTATTCATGTTTGTTTTGTGTGAGTTTGTCTGCATGAATGCGCACCACATGCACACAGTGCCCCGAGAGACTTGAGGAGTGTGCGCCACAGCTGTTGCCACCATGTGAGTGCTGAGAACTGAACCCAGATCCGCTGCAAGAACATGGTGCTTAACCTTCTCTCCAGACGTCCTTTTCTTTTCTAAAGCCCGCTGGTTGTACTTAGTGCCATCTGTGTGTGCATGGATCTAGGACCATCTACTGGAGTATGGGCAGCTTTTGGGGGCCACATCCCAGAAGAAAACTTATTCTTCTTCCCCCAGCAGCCATTATTAATTATTATTAATTCTTCTCAGTCAGGAAAGCATCATGAACTCCTCCCTGTGAGCTCCCAAGCCAGATGAGAAGTGGTAGAGCATTGCACTACCCAGACAACTCTCAGAAAGCACAGCGGGAGTGGAACTGATCCCTACTCAAATCAGGCTTGGGCCTACTCTGTTCCATAGAGACAAAGACCACGTCAGGATACAGCTACTTAGGCTGCTGTTTCCCTCATCAGAAAACTGGCTCCTCAGAAATCACATGATCAGCAGTTGCTAATCTGGCTGAAGCACTTTTTCCTTTGTCCTTTTTCCTTCCCTCCCCCCATGACTCAAGCCAGCCCCAAACAAGCTGTTCTCTGAAACAATACTCACAGCCCTCCGCATGTTCTCCAGCTCCCCCCACCCCCAACCCTGAGACTGCTGTGGGCAATGGCCAATTAGGGCCAGGGGACCCACTTCTCCTCAATCCATGCAGAAATTTTTGGCTTGTTTGATCATTTGCAGGTATGCAATCATATTCACTGTTTGTATTTGTAAACATACAGTCATATCTGCCAAATACTGTTTGTCTACAGACACCCACCTCTGCTGGCTGTTAGAGTCTTTTTACTTCCTCTTCTGCAAGGTCTCTGAGTCTTGAGACGAGGGGCTATGATACAGATGTTCCATTTAGAGCTAAGCACACCACGGTCTTACTCTCTGAACACTGACTAGCTGTAGATCTCTATATTGGCTGTTGTCTACCGCACAAGGAAGCGTCTCTGATAAGGTTGAGAGATAAACTAGTCTATGGGTATAAAGACAAGGACATAGAGGACAATGTAATACTACATTTAGCAAAATAATAGTATTAGGGTCTCCACTAGGTACTATGGCCTAACCAGTCGTGGGATTTGGCTCAGTTAACAATACCAGATATGAGTTCCATCATGTGGACTGGATTTTAAATCAAACCAGAAAGTGGTTGGTTACTCCCATAACATTTGTGCCACTATCACATGAGTGGGAACATTTTGCCAAGATAGTCATTGTAGTTCATGGAGTTCATGGCTAGATAAAAGTGCTTAATACCTTTCTCCCCGAGTAGAATAAGTAGAATATGGCACTATAAAAATCTATCCAGTAGAAATGAAGCTTTTTGGTTACTACCAGCTTGAGTTACATTCTGTGACTGAAGTGTGTGGTGTGTTCAGGGACTAGGTCTTACTATCAAGCTCTAGCAAGAGCGAGAGCAAGAGCCCTAGCCTGTAATGTTTAGAGGAATCCATGGTCCACAATAACCAGCAATATGAAAAGAGATAACCCATACCTAGCATTGGTCCTTTTATTTGATAGCCTACAGTGCCTGGGGAGGCATGCTCCTCTATTATAGGGTTAATTTAATTTAAACTCTCTTTTATATGTATATATTTTAGGAAGTTTTATACAATAGTAGGTTTCTATGAGGCATTTCCAGTGGTCTTTAGTGTTAGTCATCCTTCCTCATACGCCCCTTTATTCTACCCTCTCATATCCCAGCCCATTTAAGAAAACACACTTTTTAGTTAAGAATCATTTTCGGCTACTACAGAATCCTGGTTATAGAAATGATTCAAATTTTAGTGGAACGAAGGGTCTCCTGATAAAATGATTTAGAGTACTGGACCTGGGAAACAGCTCAGTAGGAAAAGTGGTATAAATCATGCGAGCCCAAGTTCTGCCCCCTGGACCCAAGTTTTTAAAAAGCCAGGCGTGACAGAATGTATTCCTGTGATCCCTACGCTAGATACACAGAGACAGGTGCATTCACGAGGTTCACTGGCCAACCATCCTAGGCTAATCAGTGGACTCCAGGTTCAGTGAGAGGACCCTGTTACCAGTGGTCAGCGTCTGAGCTGGGTGTTTCCAGGGTCTTGACCTCCTACCCAAAGAATTGAAAATAAGGGCACACATAGATTCACAAAAGAAGCAAGATAATTAAATTGTAAGGGAAGCAGTAAAGCAGATTATAGGGAGGTATAATGTCAAGATGGACGGCAGGCCATGTGAGTGCTCATGGACCTAACTCATGTTTGGAATTTTCTTTTATGATATGGGAGAGAAGGAGGAATTGATTACTAAGGGTATAGTTTGGGCAATTTATTTTGATTGATAGACTAGGCCATACATTTATTTTCCCTACTGTGCCTGTTCCTTCCCACAATGCGTCTGATTTTGGTCTCTCTCTCTCACATACACACTTATATACAAACACACACATACACACTCAAATAATACATTCACATTCACACACACACACACCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATAATATACACAGAGAGGATAATAAATAAATAAATAAATGCAGAAGCCAGCCCATACCTCAACTTGGGGATATTTGAATCCTGAGATTAGGCCACAAAAACTTGGATTTTTATTTGTTTGTTTGTTAAATTTTGGTTTGCTTTTGCTTGTTTGTTTTGCTTTTGTTACAGTCTTCCTCTATAATTAATGGTGGCTTAGGACTCTCCACGATGGCCAGGCTGGCCTATAACTCAAAGAAATCCTCCTGCCTCAACTTCTCAAGTGCTGGGATTGTAGGTCTGTACCATCACACCCACTGGAAAGCTGCATTTCACATGGCTGTAGCATTTAATGTGGATGCCAGAAGTTCTGACTACGCTTTAAGTTTCACGGAGTAGATGTTGGCAGAGGATGTCAGTGAACTGGTGGGGACTGGACAGCCTAGCATGCAGCCTGCCAGTCTCACCTTCCCGGTGTCTTCAGTTCTCTCTGTAAACGTAATGACAGTGTGGGGAAGCCACGCACTCTTAGGATAGTACCCCAGCACACACAGGCTGGGATGCAACTCAGTAGGGAAAGAGCTGGCTTAGTATGTGTGAGGTCCTGGGTTTGATCCCAAGCACCACCCAACCAGATGCACTAGTCCATGCCTGTGCTCTCAGGACTAGGGAGGTGGAGACAGGAGGATGAAAAGTTCAAGGTCATCTTGAGCTACATAGTAAGTTTGAGGCCAGCCCAGGCTACCTGAGAACCCCTGTCTCACAATCAAAGTGAAACATAAAACACAAACAACAGAAAGCGCTCCAACCCACATTTACCTGCTGCTCCCAACTCACACATTTCCTACCCAGGGATGCTAATCGTAAAGCATTAGGTGTTTGCATTCGCCCTGGAGTCAACTGTAATAGGGATGCTTGCCCTCTGCATCCTCATAGATCTGAGCCCCTAAGGTCTGCAGGGGGTGGGGCAGGAACATCGGGAGAAGGAGGCTTCATTACCCTCAGACAAAGGCTTGCAGCAGATTCCTCCTATGCATTCAGCAGCCTGTATAGGATTAGTGTATACAGCATGTTTAGAAGGCCCCATGCTATATCCCATTGACCGCCAGTGTCAAAGGCATGAATGCCTTTTGCTGAGGCAAGGGGAGCTCTCTGAAACTATATTTTCTCTTTTTAAAGCAAGAGTCCCAGCAAGGCTGTTGGAGGTGCCCTAAAGGTCCACAAGGCATTGTTATCTGTCCCCTGAGCCATCTCTGGCTGGCTCGCTCCCCCTCCCTGACTCCTTTCCGACTTGCCTGTGTTGCCCCTAGACCATGGGCTCAGGGGCCTCTGGACAAAGCTGCTGACTCTGACCACAGCCTTTCTCTGGACCGTGTTCATTTGCATCAAGCTGCTGAGGGTGGAGGAGCTATATAGGCTCTGGGCCATTCACCAGAGGATTAGGCCTGGGCTGAGGGTGCAGCTGGAGAGGCCGCAGGGAAGGCCGGGTTCCGCTGTTGGTCATCATGCCCTACCTGCTGCCGGGATTCTTCTGTGACAGGGTGATCCGAGAAAGGGACAGGAGAAATGGAGAGGGCACTGTCTCACAACCTCTCAAGTTTGAGGGGCAGGATTTTGTCGTTCTCAAACAACAGTGTCTGGCTCAGAAGTGCCTCTTTGAAGACCGTGTCTTCCCAGCAGGTGTGCAGGCCCTTGGCTCCCATGAGCTGAGCCAGAAAGCCAAGATGAAGGCCATCACTTGGAAGAGGCCAAAGGTAGGGATAAAGGGGGCATGGAATCTGTAGACAGATGTTGGGGAACTGGGAGTAAAGTGGTCAGAGCGTGGGGCTGTGGATTCACCCCAACTCTGAGCAACTAGCTTATTAATGTCCCCCTTACCCATAAGCCCCAGCTCCAAATACCTAACTTCTTATGCTAGAAGCTAAGGATGTTGTTTTCTATTCCTGAACTGCGTGGCGAGGGTTAGGATGGCCTTTAGATCCCTGAGATTATATTTAAGAGTGCCAATGCATTGATTTAAATTCCCATAAGATTCGTAGGTAGAATCAGCTCGGTTCTTCCCGAGACCAGGAGTTTGGGGAGGGAAGAGTGGAGTGGTGAAGAGAACAGAGGCTTGAAGTTTCAGGTCCACAGAAGGGATGGACAGTGAATTGACAGGAGGCTGGAGGCGAGCCTTAGCCTTCTGGACGAAGCTGGTTCATTAGCATGGTGTCAAGTCTGCTTAAACAGAAAAGTCCCCGCTGACCAGCCAGACAGTTGATCCAGGCTGCCCTATCAAGGGGCATCCTAGGAGCCCCAGCATGGCAGCAGGAGGACGTCAAAGCCCTTCTTCCTGCAAGGCGGTGCCTATAGCTGCAAGGGAGCCTGCTATATTTAGAGCTGGCAAGGAGTGTGCGTGTGCGTGTGCGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAAACCCAGAACATCTGCAAGGCACATTCTTTACTGTATATGCAATTTTTAATTAGTTAAATTACTTTTTAAATTTTTAATTAAATTTTAAATTAATTTTACAATTACAGGATTACATAAAAACTGTAAAGATAGCGCTGGGCTCCCATGTGTAGTCCCTCTTACCTGTGCTTTTCACTCTCTGCAGTTTTTGCTGACCTGTAGTCAACTGGGGTGCGAAAATACTAAATGGGAAATTCTTGAAATACTTCAGAAGTTTTAAATAACCTCCACTATTGTACATTGTTTTAATTATTCTATTTTATTGTAGTATTAGTCATCTCTCATTGATTTATGAGTTAAACTATTGGTGTGTGTATAGGAAGGAGTCTAATGATCTATATGGGCATTGGTCATAACCACAGTTTCAGATTCCTGGGGGTCTTGGGATATACCCCACAAGTAAGGAGACCGCTACCTTTAGTCCAGTTTTCCTTGTTATATCATGACCTGTACCTCGGCGATCAGTAAGATTGATTTGTTATTGAAAACAAAGTCCACACGTTATTTCCTTAGGGTTCTTCCTCTGTCTTTTTATGTTCCAAGACTCCTCCCTTGTATTCACTTATGTGTCTTGTGTCCTTAGCCTCCCCTCTCAAGTTTTCCTGGTTTCCAATGAGCTGTGCACTTTCACAGAGCACTAATCAGGTATTTTGTAAAACACCTCTCATGGCATCTCTCTCGAATTTTCTTCCGAGTAGGCTGAACTTATGGATTTGTTTGGGTTTTTTTATATATAATTTTTTATTTATTTTAAAGTAGCTGAGTATTTAAGTATGTGTATACCACATGCAGTGCTCATGGTGGCCACTGGATGGCACTGGAGCCCTTATAACTGACCATTACAGACCAACTGAGCTACAGACCATTGGAAGGCAGGTGCTCAACAAAGGCTGAGCCATCTCTCCAGCCCTGGGCTTATGTGCTTTGAGGAGGCTGATCGCAGAGGTCAGGCACAGACTGTAAAATGCCTCCTCACTGCTCACATTGACTACTTTGATATGTTGCACTGCTTTGGGTGCAGAAAGTCTTATAATTCTGCATGAGAGGTCTGTGTACTCTGTGTGTCTCTGTGTAGCCCTTTATACCAATACTGACTTATGCCTATTCATTGCCAGGAGAGCTATGGTATGATATGGATGTGCCTTTCTATGTAGTAGGATGGAGACAACCTTGAGTGTGAGGGCAGAGCTCAGCTCACTTGGGAGAATTGTGTAGTTGTGAGGAAGGAGAAAGACAGTGAGACAGAAAGACAGAGGACATGTCTAATTAGGGTTTCTATTGCTGTGATGAAACACCATGACCAAGACAACTTGGGCAGCAAAGTGTTTATTTCAGGTCACACTTCCAGGTAAGGAACGGCCCATCACTGAGGGAACTCAGGGCAGAAACTCAAACAGAGCAGGAACCTGGAGGCAGGAGATGATGCAGAGGCCATGGAGGGGTGCTGCTTACTGGCTTGCTCTTCATGGCTTGCTCAGCCAGCTTTCTTATAGAACCCAGTATCATCAGCCCAGCGATGGCCCCACCCACGATGGTCTGGGCCCTCCCCCCTCAATCACTAATTTAGAAAATGCCCTACAATCACATCTTATGGAGGCATTTTTCTCAGTTGAGGCTCCCTCCTTTCAGATAACTTTACTGTGTCAAGCTGACATAAAACTAGCTAGCACAGAACACTTCACAGGAATAACAAGGTTTCTTGAAGCTGTGAAGAACAACATTAAAAATCAAAACACTGAATCTTTAATGAGTTTAAAAGTTTTTTAAAAAATTGCCGGGTGTGGTGGTGCACGCCTCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACAAACAAACAAAACAAAAACAAAAAAATTTAAAACGAAGCAGACACTGAATGAAATCAAGAGTGCTGTCTGTTGGCTGCTGATGGGCGTGACTTAGCCCATGGGCTTGGAAACTGCAGCTGCCACCATTGCTGCTGTGGGTGTGTTTGCCCCTTCCAACTGGGGAGGGGGGAAGAGGTGAGGCTCTCGTGGGGTTTACAGTCTGCTTCCGCAACTGCCAAGGCCTGTGTCCGGATTTCTAAAAAGGGAAGATTGTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCTCCTCCTCCTCCTCCTCCTCCTGCTCCTCCTCCTCCTCCTCTTCCATCCTGTGCCCCAGTTTACAGAAAACAAAGCCATAAGTTCTGCAGCCTCTTGCCCGTCCCCCCTCTCAAAGAACATTCTACCCAGTACGTGGTATGGAAAGAAGAGGGGACAGCTTTGAGGCTCTTACCTCCTCTGACCCTCAGATGTTTATTGTTCATTTTGAGACAGAGTCTCCCAATGAAGCCCGGGCTGACCTTGAACTAGCCATGCTCCTGCCTCAGCTCCTCCAGTGCTGGGATTACAGCTGTGCACCAATACACCAACTTCTGAGCTTCAGCTTTCTGGTTTCAAAAGAAGAGCGCTGGCTCTCCTCTTGGATGGCTGTGGAGGCCGGGGAGGGGGACAGTGAGTGTAAATCTTTGGCCCCCAGTGCAGTAGGCCATCAGCTCAGCCAGGACTCCTACAATGGTGTTACAATGGTTGTTTCTGTTTTGATTTCACAG
Seq C2 exon
GAAATTTGTGAGAATCCCCGGTTTATCATTGGTGGAGCCAACAGGACTGACATCTGCCAAGGAGATCTAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000079110:ENSMUST00000028749:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.348 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0064816=Peptidase_C2=PU(14.2=28.2)
A:
NA
C2:
PF0064816=Peptidase_C2=FE(11.3=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types