Special

ENSG00000106069 @ hg38

Biotype
protein_coding
Gene Symbol
CHN2
Description
chimerin 2 [Source:HGNC Symbol;Acc:HGNC:1944]
Coordinates
chr7:29122274-29514328:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
19.22
36.91
0
Alternative 3'ss
84
chr7:29126329-29126412
+
78.42
41.38
0
Exon Skipping
39
chr7:29292925-29292963
+
96.26
16.65
0
Exon Skipping
56
chr7:29367932-29367987
+
96.6
22.15
0
Exon Skipping
112
chr7:29146849-29146960
+
96.62
23.67
0
Exon Skipping
39
chr7:29293570-29293608
+
51.16
70.42
0
Exon Skipping
4
chr7:29127407-29127410
+
16.14
96.82
0
Exon Skipping
132
chr7:29513620-29513751
+
21.72
89.19
0
Exon Skipping
159
chr7:29194832-29194990
+
12.03
31.98
0
Exon Skipping
168
chr7:29323221-29323388
+
1.97
29.52
0
Exon Skipping
126
chr7:29127454-29127579
+
3.15
15.77
0
Exon Skipping
84
chr7:29126856-29126939
+
7.75
38.73
0
Exon Skipping
298
chr7:29126329-29126626
+
95.16
22.22
0
Intron Retention
3157
chr7:29509407-29512563
+
7.26
63.8
0
Intron Retention
79450
chr7:29400829-29480278
+
15.16
70.01
0
Intron Retention
15595
chr7:29480357-29495951
+
4.05
58.44
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000004633 Chn2 1-to-1
Mouse mm9 ENSMUSG00000004633 Chn2 1-to-1
Rat rn6 ENSRNOG00000009411 Chn2 2-to-1
Cow bosTau6 ENSBTAG00000020931 CHN2 1-to-1
Chicken galGal4 ENSGALG00000011164 CHN2 1-to-1
Chicken galGal3 ENSGALG00000011164 CHN2 1-to-1
Zebrafish danRer10 ENSDARG00000011845 chn2 1-to-1
Fruitfly dm6 FBgn0029778 RhoGAP5A 2-to-1