HsaEX6037003 @ hg38
Exon Skipping
Gene
ENSG00000185842 | DNAH14
Description
dynein axonemal heavy chain 14 [Source:HGNC Symbol;Acc:HGNC:2945]
Coordinates
chr1:225324222-225346654:+
Coord C1 exon
chr1:225324222-225324353
Coord A exon
chr1:225324737-225324832
Coord C2 exon
chr1:225346456-225346654
Length
96 bp
Sequences
Splice sites
3' ss Seq
GTTCTGACATTCTCTTTAAGGTT
3' ss Score
9.09
5' ss Seq
CTGGTAAGA
5' ss Score
9.45
Exon sequences
Seq C1 exon
GTTTTCGTGAAGCTAAAAAAAATTGTAACCTTACCTGATTTCAACCCACACAAGATTTCGCTGGTTTCTGTTGCTTGTTGCTCCCTGTGCCAGTGGGTTATAGCTTTGAATAACTACCATGAAGTACAGAAG
Seq A exon
GTTGTGGGCCCTAAACAAATCCAAGTAGCTGAAGCTCAAAACGTCCTTAAAATTGCGCGACAAAGACTTGCTGAGAAACAAAGAGGTTTACAGCTG
Seq C2 exon
GTGGTTTCTTCAGCTCTATTTAATGAAGATAAACTTTGCTTCTCTTTTCGGCTTTGCACTGTAATCATGCAAAACAATGCTAATGGAAATCTAATACAGGATGACATTGGATTCCTACCAGAAGAAGAATGGAACATCTTTTTATATTCTGGCATATTGATAAATATTAAAAGTGCATTATCCCAGTCTAGACTTACTA
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000185842_MULTIEX2-65/72=64-C2
Average complexity
C3
Mappability confidence:
98%=99=100%
Protein Impact
Alternative protein isoforms (Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF127772=MT=FE(14.8=100)
A:
PF127772=MT=FE(12.9=100),PF127812=AAA_9=PU(1.2=3.1)
C2:
NO
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
ACCTGATTTCAACCCACACAAGA
R:
GCATGATTACAGTGCAAAGCCG
Band lengths:
170-266
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains