Special

ENSG00000162613 @ hg38

Biotype
protein_coding
Gene Symbol
FUBP1
Description
far upstream element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4004]
Coordinates
chr1:77944055-77979110:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
57.23
27.49
0
Alternative 3'ss
5
chr1:77947548-77947552
-
42.77
27.49
0
Alternative 3'ss
0
NA
-
66.24
74.64
0
Alternative 3'ss
3
chr1:77967099-77967101
-
33.76
74.64
0
Exon Skipping
146
chr1:77949155-77949300
-
99.15
33.96
0
Exon Skipping
63
chr1:77969022-77969084
-
9.36
58.04
1
Exon Skipping
47
chr1:77946530-77946576
-
94.54
71.05
0
Exon Skipping
137
chr1:77945506-77945642
-
97.69
37.28
0
Exon Skipping
91
chr1:77969925-77970015
-
99.99
0.3
1
Exon Skipping
40
chr1:77967627-77967666
-
99.63
37.84
0
Exon Skipping
72
chr1:77966884-77966955
-
99.77
27.27
0
Exon Skipping
95
chr1:77947453-77947547
-
63.62
100
0
Intron Retention
1602
chr1:77947553-77949154
-
87.43
97.78
0
Intron Retention
1721
chr1:77968204-77969924
-
6.32
53.76
0
Intron Retention
876
chr1:77946577-77947452
-
79.37
100
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000028034 Fubp1 1-to-1
Mouse mm9 ENSMUSG00000028034 Fubp1 1-to-1
Rat rn6 ENSRNOG00000043370 Fubp1 1-to-1
Cow bosTau6 ENSBTAG00000008926 FUBP1 1-to-1
Chicken galGal4 ENSGALG00000008939 FUBP1 1-to-1
Chicken galGal3 ENSGALG00000008939 FUBP1 1-to-1
Zebrafish danRer10 ENSDARG00000029248 fubp1 1-to-1
Fruitfly dm6 FBgn0014870 Psi 3-to-1