Special

ENSMUSG00000028034 @ mm10

Biotype
protein_coding
Gene Symbol
Fubp1
Description
far upstream element (FUSE) binding protein 1 [Source:MGI Symbol;Acc:MGI:1196294]
Coordinates
chr3:152210422-152236826:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
59.95
77.45
0
Alternative 3'ss
3
chr3:152217832-152217834
+
40.01
77.45
0
Alternative 5'ss
0
NA
+
28.25
67.39
0
Alternative 5'ss
9
chr3:152226209-152226217
+
71.75
67.39
0
Exon Skipping
100
chr3:152233603-152233702
+
48.13
100
0
Exon Skipping
63
chr3:152214825-152214887
+
11.65
43.59
1
Exon Skipping
58
chr3:152218213-152218270
+
99.98
0.75
0
Exon Skipping
91
chr3:152213977-152214067
+
100
0
1
Intron Retention
2714
chr3:152223366-152226079
+
10.49
51.89
0
Intron Retention
1953
chr3:152226218-152228170
+
7.75
61
0
Intron Retention
372
chr3:152232023-152232394
+
16.32
71.63
0
Intron Retention
386
chr3:152217449-152217834
+
3.57
68.88
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000162613 FUBP1 1-to-1
Human hg19 ENSG00000162613 FUBP1 1-to-1
Rat rn6 ENSRNOG00000043370 Fubp1 1-to-1
Cow bosTau6 ENSBTAG00000008926 FUBP1 1-to-1
Chicken galGal4 ENSGALG00000008939 FUBP1 1-to-1
Chicken galGal3 ENSGALG00000008939 FUBP1 1-to-1
Zebrafish danRer10 ENSDARG00000029248 fubp1 1-to-1
Fruitfly dm6 FBgn0014870 Psi 3-to-1