Special

ENSRNOG00000052539 @ rn6

Biotype
protein_coding
Gene Symbol
Prpf40b
Description
pre-mRNA processing factor 40 homolog B [Source:RGD Symbol;Acc:1565411]
Coordinates
chr7:140967282-140981583:+
Assembly
rn6

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]


EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
61.25
44.72
0
Alternative 3'ss
3
chr7:140979965-140979967
+
38.75
44.72
0
Exon Skipping
81
chr7:140967288-140967368
+
94.98
20.31
0
Exon Skipping
28
chr7:140969174-140969201
+
78.37
100
0
Exon Skipping
26
chr7:140969413-140969438
+
98.43
39.39
0
Exon Skipping
143
chr7:140974718-140974860
+
1.72
11.76
0
Intron Retention
147
chr7:140973825-140973971
+
34.56
81.82
0
Intron Retention
210
chr7:140979483-140979692
+
23.73
72.46
0
Intron Retention
94
chr7:140980717-140980810
+
13.44
36.94
0
Intron Retention
642
chr7:140968532-140969173
+
15.01
60.4
0
Intron Retention
211
chr7:140969202-140969412
+
9.25
32.23
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000110844 PRPF40B 1-to-1
Human hg19 ENSG00000110844 PRPF40B 1-to-1
Mouse mm10 ENSMUSG00000023007 Prpf40b 1-to-1
Mouse mm9 ENSMUSG00000023007 Prpf40b 1-to-1
Cow bosTau6 ENSBTAG00000016589 PRPF40B 1-to-1
Fruitfly dm6 FBgn0031492 CG3542 2-to-1
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