Special

ENSG00000168026 @ hg19

Biotype
protein_coding
Gene Symbol
TTC21A
Description
tetratricopeptide repeat domain 21A [Source:HGNC Symbol;Acc:30761]
Coordinates
chr3:39149152-39180394:+
Assembly
hg19
Other assemblies
hg38

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
27.5
51.48
0
Alternative 3'ss
43
chr3:39177848-39177890
+
72.5
51.48
0
Alternative 5'ss
0
NA
+
19.12
37.85
0
Alternative 5'ss
134
chr3:39178745-39178878
+
80.88
37.85
0
Exon Skipping
130
chr3:39167752-39167881
+
37.44
99.01
0
Exon Skipping
130
chr3:39150576-39150705
+
95.12
40.68
0
Exon Skipping
111
chr3:39151520-39151630
+
94.41
40
0
Exon Skipping
167
chr3:39152342-39152508
+
92.37
38.1
0
Exon Skipping
123
chr3:39153949-39154071
+
91.24
36.07
0
Exon Skipping
111
chr3:39171739-39171849
+
57.48
66.04
0
Exon Skipping
139
chr3:39172192-39172330
+
74.44
65.59
0
Exon Skipping
104
chr3:39172483-39172586
+
82.62
42.44
0
Exon Skipping
99
chr3:39161413-39161511
+
84.09
87.18
0
Intron Retention
728
chr3:39167024-39167751
+
16.43
41.09
0
Intron Retention
139
chr3:39170424-39170562
+
28.63
71.88
0
Intron Retention
96
chr3:39171643-39171738
+
26.83
76.6
0
Intron Retention
342
chr3:39171850-39172191
+
40.33
74.16
0
Intron Retention
152
chr3:39172331-39172482
+
23.6
50.99
0
Intron Retention
1956
chr3:39172587-39174542
+
43.38
80.75
0
Intron Retention
764
chr3:39175820-39176583
+
26.03
65.48
0
Intron Retention
1182
chr3:39176666-39177847
+
39.52
97.25
0
Intron Retention
391
chr3:39177999-39178389
+
15.27
100
0
Intron Retention
134
chr3:39178552-39178685
+
10.86
97.71
0
Intron Retention
98
chr3:39178879-39178976
+
17.02
97.87
0
Intron Retention
556
chr3:39179202-39179757
+
13.68
99.08
0
Intron Retention
168
chr3:39179879-39180046
+
7.15
94.52
0
Intron Retention
87
chr3:39180115-39180201
+
7.05
100
0
Intron Retention
2004
chr3:39154072-39156075
+
11.35
29.58
0
Intron Retention
976
chr3:39161512-39162487
+
37.97
70.73
0
Intron Retention
3873
chr3:39162681-39166553
+
26.19
59.64
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000032514 Ttc21a 1-to-1
Mouse mm9 ENSMUSG00000032514 Ttc21a 1-to-1
Rat rn6 ENSRNOG00000034089 Ttc21a 1-to-1
Cow bosTau6 ENSBTAG00000010477 TTC21A 1-to-1
Chicken galGal4 ENSGALG00000010956 TTC21B 2-to-1
Chicken galGal3 ENSGALG00000010956 TTC21B 2-to-1
Zebrafish danRer10 ENSDARG00000012368 ttc21b 2-to-1
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