Special

ENSG00000168026 @ hg38

Biotype
protein_coding
Gene Symbol
TTC21A
Description
tetratricopeptide repeat domain 21A [Source:HGNC Symbol;Acc:HGNC:30761]
Coordinates
chr3:39107704-39138903:+
Assembly
hg38
Other assemblies
hg19

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
26.64
60.68
0
Alternative 3'ss
43
chr3:39136357-39136399
+
60.86
70.92
0
Alternative 5'ss
0
NA
+
19.11
39.93
0
Alternative 5'ss
134
chr3:39137254-39137387
+
80.79
39.93
0
Alternative 5'ss
0
NA
+
91.88
28.24
0
Alternative 5'ss
67
chr3:39112581-39112647
+
8.12
28.24
0
Exon Skipping
82
chr3:39135093-39135174
+
94.05
54.52
0
Exon Skipping
130
chr3:39126261-39126390
+
37.97
99.01
0
Exon Skipping
130
chr3:39109085-39109214
+
94.79
39.34
0
Exon Skipping
111
chr3:39110029-39110139
+
93.29
40
0
Exon Skipping
167
chr3:39110851-39111017
+
92.2
38.1
0
Exon Skipping
123
chr3:39112458-39112580
+
91.65
32.35
0
Exon Skipping
111
chr3:39130248-39130358
+
54.96
64.25
0
Exon Skipping
139
chr3:39130701-39130839
+
72.53
67.06
0
Exon Skipping
104
chr3:39130992-39131095
+
83.01
43.6
0
Exon Skipping
99
chr3:39119922-39120020
+
81.86
87.18
0
Exon Skipping
41
chr3:39131606-39131646
+
11.96
26.51
0
Intron Retention
171
chr3:39125161-39125331
+
10.94
76.09
0
Intron Retention
728
chr3:39125533-39126260
+
25.29
57.4
0
Intron Retention
228
chr3:39128489-39128716
+
12.28
96
0
Intron Retention
139
chr3:39128933-39129071
+
33.46
91.3
0
Intron Retention
768
chr3:39129311-39130078
+
6.23
82.06
0
Intron Retention
96
chr3:39130152-39130247
+
40.31
99.09
0
Intron Retention
342
chr3:39130359-39130700
+
51.99
91.61
0
Intron Retention
152
chr3:39130840-39130991
+
29.55
89.9
0
Intron Retention
1956
chr3:39131096-39133051
+
49.51
98.55
0
Intron Retention
977
chr3:39133241-39134217
+
18.45
100
0
Intron Retention
764
chr3:39134329-39135092
+
24.73
65.48
0
Intron Retention
1182
chr3:39135175-39136356
+
37.09
100
0
Intron Retention
391
chr3:39136508-39136898
+
21.42
100
0
Intron Retention
134
chr3:39137061-39137194
+
22.43
100
0
Intron Retention
98
chr3:39137388-39137485
+
24.5
98.55
0
Intron Retention
556
chr3:39137711-39138266
+
13.42
100
0
Intron Retention
168
chr3:39138388-39138555
+
17.47
94.52
0
Intron Retention
87
chr3:39138624-39138710
+
13.51
100
0
Intron Retention
711
chr3:39110140-39110850
+
13.3
60.67
0
Intron Retention
2004
chr3:39112581-39114584
+
14.05
50.41
0
Intron Retention
976
chr3:39120021-39120996
+
39.79
69.01
0
Intron Retention
3873
chr3:39121190-39125062
+
27.6
59.26
0
Intron Retention
1943
chr3:39126391-39128333
+
49.63
91.38
0
Intron Retention
1744
chr3:39118178-39119921
+
84.31
87.42
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000032514 Ttc21a 1-to-1
Mouse mm9 ENSMUSG00000032514 Ttc21a 1-to-1
Rat rn6 ENSRNOG00000034089 Ttc21a 1-to-1
Cow bosTau6 ENSBTAG00000010477 TTC21A 1-to-1
Chicken galGal3 ENSGALG00000010956 TTC21B 2-to-1
Zebrafish danRer10 ENSDARG00000102541 TTC21A 1-to-1
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