Special

ENSG00000082438 @ hg38

Biotype
protein_coding
Gene Symbol
COBLL1
Description
cordon-bleu WH2 repeat protein like 1 [Source:HGNC Symbol;Acc:HGNC:23571]
Coordinates
chr2:164653624-164843679:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
27
chr2:164695807-164695833
-
25.02
44
0
Alternative 3'ss
30
chr2:164695807-164695836
-
74.86
44
0
Alternative 5'ss
0
NA
-
28.24
59.91
0
Alternative 5'ss
29
chr2:164841710-164841738
-
71.35
59.91
0
Exon Skipping
117
chr2:164703104-164703220
-
16.36
97.29
0
Exon Skipping
237
chr2:164722075-164722311
-
98.66
25.29
0
Exon Skipping
131
chr2:164779655-164779785
-
6.43
20.9
0
Exon Skipping
229
chr2:164727969-164728197
-
98.54
35.71
0
Exon Skipping
39
chr2:164727106-164727144
-
10.5
54.1
0
Exon Skipping
98
chr2:164722425-164722522
-
98.83
29.6
0
Exon Skipping
82
chr2:164797969-164798050
-
10.54
42.57
0
Exon Skipping
116
chr2:164678768-164678883
-
34.17
100
0
Exon Skipping
188
chr2:164675820-164676007
-
4.1
16
0
Intron Retention
6188
chr2:164686033-164692220
-
7.26
38.98
0
Intron Retention
5446
chr2:164722523-164727968
-
6.97
70.37
0
Intron Retention
16969
chr2:164705106-164722074
-
9.69
68.97
0
Intron Retention
3687
chr2:164700757-164704443
-
8.19
40.82
0
Intron Retention
710
chr2:164841247-164841956
-
72.45
19.32
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000034903 Cobll1 1-to-1
Mouse mm9 ENSMUSG00000034903 Cobll1 1-to-1
Rat rn6 ENSRNOG00000027016 Cobll1 1-to-1
Cow bosTau6 ENSBTAG00000005501 1-to-2
Cow bosTau6 ENSBTAG00000047880 1-to-2
Chicken galGal4 ENSGALG00000011068 COBLL1 1-to-1
Chicken galGal3 ENSGALG00000011068 COBLL1 1-to-1
Zebrafish danRer10 ENSDARG00000089858 COBLL1 (1 of 2) 1-to-2
Zebrafish danRer10 ENSDARG00000102829 COBLL1 (2 of 2) 1-to-2