DmeEX0009879 @ dm6

Exon Skipping

Gene

Description

The gene toutatis is referred to in FlyBase by the symbol Dmel ou (CG10897, FBgn0033636). It is a protein_coding_gene from Dmel. It has 6 annotated transcripts and 6 polypeptides (5 unique). Gene sequence location is 2R:11577485..11616045. Its molecular function is described by: protein binding; transcription factor binding; DNA binding. It is involved in the biological process described with: ATP-dependent chromatin remodeling; nervous system development; positive regulation of transcription by RNA polymerase II. 67 alleles are reported. The phenotypes of these alleles manifest in: trichogen cell; wing; dorsocentral bristle; wing vein L5; scutellar bristle. The phenotypic classes of alleles include: fertile; visible; partially lethal; lethal; viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages.

Coordinates

chr2R:11591685-11616045:-

Coord C1 exon

chr2R:11615579-11616045

Coord A exon

chr2R:11591993-11592175

Coord C2 exon

chr2R:11591685-11591930

Length

183 bp

Sequences

Splice sites

3' ss Seq

ATTTTCTAAATCCTTTGCAGACT

3' ss Score

8.5

5' ss Seq

TCGGTAAGA

5' ss Score

10.53

Exon sequences

Seq C1 exon

ATCGGTTTCTCTATCGAAGCGTTCGGACGTCGAAAAGATAAACCCCAATTTAAATCTAATCCATCTGCGAGCAAATTAAACAACAATAATGATAGATTCTTAAGCGGCGCGCACATACGTGTCTTATTAATCGATTTTGATGTTTAAAAAATAATATAGAAAGTTGAAGTGAACTTGCAAACCTCGCGAATAGCTGGAAATTTGCGCGTGTGCGGGTGGAACAGTGACACTCGTGTGAAAATCATCGCTAAGGAAAAGGCGGATAATATAAAGGAAAAACGCCCGCGGCGAAAATTATTCCATTGGTGTGAGTGTGCAAAAAAAAGGAAGAAATATCAAGAGCAAAGAAGTTCGAGAAATTGCTAAAAATTAAGTGTGTTTGTGCTTGTGTGAGTGGGTGACAAATGAATGGGCAGCAAAAAGACGAGAAGTCAATCAGCGATAAGCAGTTTAAACAAACAAAAAAG

Seq A exon

ACTCCCAACGCATGTTACGCACAATAGTTGGTCCTAAGAACTAGGGGATTTTGAACATGAACAAAAATGCCGGCGATGGCAGCGATGGCAAAAACTCAAACAAAAACTCGAATGCGGGAGGGGGTGGTGGAGCCGGGGGGCCACACGACCCCACCGGCCTTTTAGATGCAGCTTCCCTGTTCG

Seq C2 exon

CTTACTGGGGACGTGATCCAACTGGAGCGGCGGCTGCAGCGGCTTCCAATCCGCTCTTCAACTCGCAGTTCAATGCCGCCGCTGCTGCCGGATTGGGTTTATTGCCACAAGCTGGAGGCGCCTCTGCCAATGACCGTTATTCCATGGCAGCAGCAGCGGCGGCTGCGGCGGGAGCCCATCACCACCAGAACACGATGGCAGTGGCCGCTTCCCAGGCCGCCAGTTTGGCCGGTTTGCATCCAGCAA

VastDB Features

Vast-tools module Information

Secondary ID

FBgn0033636-'0-9,'0-8,12-9

Average complexity

C1

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref, Alt. ATG (>10 exons))

No structure available

Features