DmeEX0006735 @ dm6

Exon Skipping

Gene

Description

The gene Tequila is referred to in FlyBase by the symbol Dmel eq (CG4821, FBgn0023479). It is a protein_coding_gene from Dmel. It has 5 annotated transcripts and 5 polypeptides (4 unique). Gene sequence location is 3L:9074643..9092131. Its molecular function is described by: serine-type endopeptidase activity; chitin binding; scavenger receptor activity. It is involved in the biological process described with 6 unique terms, many of which group under: organic substance metabolic process; macromolecule metabolic process; nitrogen compound metabolic process; multicellular organismal process; system process. 13 alleles are reported. No phenotypic data is available. The phenotypic classes of alleles include: phenotype; increased mortality; stress response defective; visible. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of low expression to a trough of extremely low expression. Peak expression observed within 12-24 hour embryonic stages, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes.

Coordinates

chr3L:9075064-9089948:+

Coord C1 exon

chr3L:9075064-9075622

Coord A exon

chr3L:9076858-9076977

Coord C2 exon

chr3L:9087849-9089948

Length

120 bp

Sequences

Splice sites

3' ss Seq

GACCACTTTTTCGTTTACAGCTG

3' ss Score

10.28

5' ss Seq

AGAGTTGTG

5' ss Score

-20.96

Exon sequences

Seq C1 exon

AGTTGGCTTATCAGCAACAGGGAACGCACACTCGAGTTACGGAGGCGACCAGCAGCAGCCTATTTACCATCGGGATTCGGCATGCCCGCCGCATTTTACGGGTCTGGTTGCATATCCCCACGACTGTCATCGCTATGTGAACTGCTTCGATGGCAGCCCCACCATTCAGACGTGTTCGCCCGGAACTCTGTTCAATGACAGGACCCAGGTGTGCGATCATCCCAGCAATGTGGTTTGCCCTTCAGCGGAATCTGCATCTACTCGACTGGGAAGACTTAGGCAATTAGATAGTGAACCCAAGTGTCAACCGGGAGTGAATGGATTGCAACCGCATCCTTCGGATTGCAGCAAGTTTCTTAACTGCGCCAATGGTCAAGCTTTTATTATGGACTGCGCACCAGGAACTGCTTTTAGTCCAGCATCACTGGTATGTGTGCACAAGGATTTGGCCAAATGCGGATCGGGAACTGGAGCAGTACGAGATGATACCTCCGGCACCG

Seq A exon

CTGAGTTTATGGTGGATCGTTCGACGCTTTCTTGTCCTCCACAAGCACAGGGACTCTATCTGCATCCCTTCGATTGCACCAAGTATGTCAGGTGCTGGAATCAGCAGACCTTCATTGAGA

Seq C2 exon

ACAACCGTCAATCCAAGTCATATGAGACATCTGGCAGGGATCAGTTCGGCAACCGATATACAACCAGAACTACCACGACAACGCGGGTGATCGGAGACCGTTGGACGGATATGAACATGCAGCGACCTTCAGGTGTAGGTGTGGAACAAAATCCGCATCATCATCATCATGGATACAACCCGGGTTGGTCTGGCCAGGAGACATCCTACGTTCAGCGTGGACCTACACAAAGTACTCTATATGTGGAGGGATCGCTACAGCCGAACCGTAATTATCCTACCAATAAGACTCCATTGGCCCCCATGGCACCGACCAATACAGGAGGTGTCTACTACGGCCAGCCCGTTGAAGACAAACAAAATGTGCCGTCGCGTCAGAACTATAGTCGCAGAATTGATTATGGCTCGCCTGGCAATGGATGGAAACCTATGCCACCACTGGATCCATTGGGCGGACAGCAACCATTAAATCTAGATTATTCTCCCCATTCTCCTGGTGCC

VastDB Features

Vast-tools module Information

Secondary ID

FBgn0023479_MULTIEX1-4/10=C1-10

Average complexity

C1*

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features