Special

ENSMUSG00000030102 @ mm10

Biotype
protein_coding
Gene Symbol
Itpr1
Description
inositol 1,4,5-trisphosphate receptor 1 [Source:MGI Symbol;Acc:MGI:96623]
Coordinates
chr6:108213096-108551109:+
Assembly
mm10
Other assemblies
mm9

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
53.56
8.5
0
Alternative 3'ss
3
chr6:108432646-108432648
+
46.44
8.5
0
Alternative 5'ss
0
NA
+
54.81
92.86
0
Alternative 5'ss
27
chr6:108388339-108388365
+
45.19
92.86
0
Alternative 5'ss
0
NA
+
85.3
14.91
0
Alternative 5'ss
18
chr6:108238326-108238343
+
14.7
14.91
0
Exon Skipping
71
chr6:108241264-108241334
+
99.8
4.65
1
Exon Skipping
126
chr6:108399250-108399375
+
98.35
38.36
0
Exon Skipping
116
chr6:108339507-108339622
+
99.4
44.3
0
Exon Skipping
121
chr6:108410809-108410929
+
98.63
37.02
0
Exon Skipping
38
chr6:108416177-108416214
+
2.63
100
0
Exon Skipping
149
chr6:108416810-108416958
+
98.49
40.5
0
Exon Skipping
201
chr6:108481223-108481423
+
99.16
37.32
0
Exon Skipping
161
chr6:108523288-108523448
+
99.47
36.78
0
Exon Skipping
159
chr6:108351993-108352151
+
99.4
35.35
0
Exon Skipping
41
chr6:108365303-108365343
+
46.22
80.25
0
Exon Skipping
181
chr6:108471023-108471203
+
97.02
41.74
0
Exon Skipping
33
chr6:108423333-108423365
+
14.76
96.93
0
Exon Skipping
36
chr6:108431461-108431496
+
18.63
97.12
0
Exon Skipping
51
chr6:108432646-108432696
+
32.37
95.78
0
Exon Skipping
27
chr6:108238299-108238325
+
3.92
100
0
Exon Skipping
166
chr6:108519285-108519450
+
99.72
29.34
0
Exon Skipping
140
chr6:108518690-108518829
+
99.71
27.54
0
Exon Skipping
93
chr6:108517526-108517618
+
99.56
35.79
0
Exon Skipping
196
chr6:108515758-108515953
+
99.42
43.97
0
Exon Skipping
165
chr6:108510695-108510859
+
99.27
51.95
0
Exon Skipping
176
chr6:108505877-108506052
+
99.29
51.81
0
Exon Skipping
123
chr6:108499108-108499230
+
98.95
41.33
0
Exon Skipping
193
chr6:108493701-108493893
+
99.01
39.55
0
Exon Skipping
105
chr6:108489815-108489919
+
99.06
36.79
0
Exon Skipping
123
chr6:108488486-108488608
+
98.98
36.33
0
Exon Skipping
96
chr6:108485243-108485338
+
99.02
42.09
0
Exon Skipping
254
chr6:108473407-108473660
+
98.71
46.51
0
Exon Skipping
191
chr6:108440497-108440687
+
98.45
41.6
0
Exon Skipping
133
chr6:108438300-108438432
+
98.13
45.69
0
Exon Skipping
112
chr6:108417889-108418000
+
98.33
42.72
0
Exon Skipping
185
chr6:108413769-108413953
+
98.59
41.06
0
Exon Skipping
129
chr6:108406090-108406218
+
98.67
29.67
0
Exon Skipping
126
chr6:108405400-108405525
+
98.31
31.67
0
Exon Skipping
252
chr6:108403272-108403523
+
97.81
39.6
0
Exon Skipping
201
chr6:108401313-108401513
+
97.68
46.76
0
Exon Skipping
138
chr6:108395976-108396113
+
99.05
32.64
0
Exon Skipping
66
chr6:108394835-108394900
+
98.94
37.92
0
Exon Skipping
171
chr6:108394235-108394405
+
98.89
42.27
0
Exon Skipping
139
chr6:108391831-108391969
+
98.83
32.96
0
Exon Skipping
188
chr6:108389367-108389554
+
98.74
33.49
0
Exon Skipping
181
chr6:108388185-108388365
+
98.54
39.88
0
Exon Skipping
142
chr6:108387364-108387505
+
98.5
47.54
0
Exon Skipping
252
chr6:108386620-108386871
+
99.14
29.48
0
Exon Skipping
195
chr6:108383621-108383815
+
99.19
29.83
0
Exon Skipping
120
chr6:108382105-108382224
+
98.69
37.42
0
Exon Skipping
173
chr6:108381188-108381360
+
98.93
30.54
0
Exon Skipping
142
chr6:108378162-108378303
+
99.2
33.52
0
Exon Skipping
161
chr6:108377685-108377845
+
99.12
45.34
0
Exon Skipping
100
chr6:108376762-108376861
+
99.29
40.23
0
Exon Skipping
96
chr6:108363610-108363705
+
99.04
41.03
0
Exon Skipping
147
chr6:108356391-108356537
+
99
41.46
0
Exon Skipping
84
chr6:108356200-108356283
+
99.24
38.43
0
Exon Skipping
99
chr6:108354607-108354705
+
99.32
35.78
0
Exon Skipping
87
chr6:108349598-108349684
+
99.38
40.18
0
Intron Retention
3667
chr6:108365344-108369010
+
2.32
54.59
0
Intron Retention
1028
chr6:108388339-108389366
+
29.32
79.49
0
Intron Retention
1071
chr6:108517619-108518689
+
4.14
51.93
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000150995 ITPR1 1-to-1
Human hg19 ENSG00000150995 ITPR1 1-to-1
Rat rn6 ENSRNOG00000007104 Itpr1 1-to-1
Cow bosTau6 ENSBTAG00000020455 ITPR1 1-to-1
Chicken galGal4 ENSGALG00000008294 ITPR1 1-to-1
Chicken galGal3 ENSGALG00000008294 Q9DEX2_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000014655 itpr1a 1-to-2
Zebrafish danRer10 ENSDARG00000074149 itpr1b 1-to-2
Retrieved from "https://vastdb.crg.eu/wiki/Special:VastDB"